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src/a/i/AIGO-0.1.0/AIGO/FunctionalAnnotation.py   AIGO(Download)
                self.GPtoGO, self.GOtoGP = IO.extract_GP2GO(self.fileName, self.G, refSet=self.refSet)
            elif fileType=="AFFY":
                self.GPtoGO, self.GOtoGP = IO.extract_Affy(self.fileName, self.G, refSet=self.refSet)
            elif fileType=="AID":
                self.GPtoGO, self.GOtoGP = IO.extract_AID(self.fileName, self.G, refSet=self.refSet)
            elif fileType=="SCOP":
                self.GPtoGO, self.GOtoGP = IO.extract_SCOP(self.fileName, self.G, refSet=self.refSet)
            elif fileType=="GNISD": #gene networks in seed development format http://seedgenenetwork.net/annotate#arabidopsis
                self.GPtoGO, self.GOtoGP = IO.extract_Affy(self.fileName, self.G, refSet=self.refSet, GO_columns=[6, 7, 8], filetype="GNIS-Affy", delimiter='	', quoting=csv.QUOTE_MINIMAL)