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src/a/r/ARC-HEAD/ARC/runners/mapper.py   ARC(Download)
from ARC import logger
#from ARC import Assembler
from ARC.runners import Base
from ARC.runners import Assembler
from ARC.runners import AssemblyChecker
class Mapper(Base):
    """
    This calss handles mapping jobs, as well as converting map results into a text version of a dict.
    required params:
        PE1, PE2, SE, format, mapper, numcycles, reference, sample, verbose, working_dir

src/a/r/ARC-HEAD/ARC/runners/assembly_checker.py   ARC(Download)
from ARC import exceptions
from ARC import logger
from ARC.runners import Base
from ARC.runners import Finisher
# from ARC.runner import AssemblyChecker
 
 
class AssemblyChecker(Base):

src/a/r/ARC-HEAD/ARC/runners/finisher.py   ARC(Download)
from ARC import logger
from ARC import exceptions
from ARC.runners import Base
from collections import Counter
import traceback
import sys
 
 
class Finisher(Base):

src/a/r/ARC-HEAD/ARC/runners/assembler.py   ARC(Download)
from ARC import logger
from ARC import exceptions
from ARC.runners import Base
import traceback
import sys
 
 
class Assembler(Base):