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File Parser Class for two ELAND multi Files for Pair-End sequencing.

Note this parser can only work for s_N_eland_multi.txt format.

Each line of the output file contains the following fields: 
1. Sequence name 
2. Sequence 
3. Either NM, QC, RM (as described above) or the following: 
4. x:y:z where x, y, and z are the number of exact, single-error, and 2-error matches 
found (more...)

src/a/r/AREM-1.0.1/AREM/OptValidator.py   AREM(Download)
from subprocess import Popen, PIPE
from math import log
from AREM.IO.Parser import BEDParser, ELANDResultParser, ELANDMultiParser, ELANDExportParser, PairEndELANDMultiParser, SAMParser, BAMParser, BowtieParser,  guess_parser
# ------------------------------------
# constants