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        def guess_parser ( fhd ):
    parser_dict = {"BED":BEDParser,
                   "ELAND":ELANDResultParser,
                   "ELANDMULTI":ELANDMultiParser,
                   "ELANDEXPORT":ELANDExportParser,
                   "SAM":SAMParser,
                   "BAM":BAMParser,
                   "BOWTIE":BowtieParser
                   }
    order_list = ("BAM",
                  "BED",
                  "ELAND",
                  "ELANDMULTI",
                  "ELANDEXPORT",
                  "SAM",
                  "BOWTIE",
                  )
    
    for f in order_list:
        p = parser_dict[f](fhd)
        s = p.sniff()
        if s:
            logging.info("Detected format is: %s" % (f) )
            return p
    raise Exception("Can't detect format!")
        


src/a/r/AREM-1.0.1/AREM/OptValidator.py   AREM(Download)
from subprocess import Popen, PIPE
from math import log
from AREM.IO.Parser import BEDParser, ELANDResultParser, ELANDMultiParser, ELANDExportParser, PairEndELANDMultiParser, SAMParser, BAMParser, BowtieParser,  guess_parser
# ------------------------------------
# constants