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src/p/y/Pymol-script-repo-HEAD/modules/ADT/AutoDockTools/MoleculePreparation.py   Pymol-script-repo(Download)
from AutoDockTools.atomTypeTools import LonepairMerger
from AutoDockTools.atomTypeTools import SolvationParameterizer
from AutoDockTools.atomTypeTools import AromaticCarbonManager
from AutoDockTools.atomTypeTools import AutoDock4_AtomTyper
 
        #detect aromatic cycle carbons and rename them for AutoDock3 
        rename = self.version==3
        ACM = self.ACM = AromaticCarbonManager(rename=rename)
        self.aromCs = self.ACM.setAromaticCarbons(molecule) 
 

src/p/y/Pymol-script-repo-HEAD/modules/ADT/AutoDockTools/VisionInterface/AdtNodes.py   Pymol-script-repo(Download)
from AutoDockTools.atomTypeTools import AutoDock4_AtomTyper
from AutoDockTools.atomTypeTools import NonpolarHydrogenMerger, LonepairMerger
from AutoDockTools.atomTypeTools import AromaticCarbonManager, SolvationParameterizer
from AutoDockTools.MoleculePreparation import RotatableBondManager
from AutoDockTools.MoleculePreparation import LigandWriter, AD4LigandWriter