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Alphabets used in Seq objects etc to declare sequence type and letters.

This is used by sequences which contain a finite number of similar words.

src/b/i/biopython-1.63/Bio/SeqIO/SwissIO.py   biopython(Download)
from Bio import Seq
from Bio import SeqRecord
from Bio import Alphabet
from Bio import SeqFeature
from Bio import SwissProt

src/b/i/biopython-HEAD/Bio/SeqIO/SwissIO.py   biopython(Download)
from Bio import Seq
from Bio import SeqRecord
from Bio import Alphabet
from Bio import SeqFeature
from Bio import SwissProt

src/b/i/biopython-1.63/Bio/SeqIO/UniprotIO.py   biopython(Download)
from Bio import Seq
from Bio import SeqFeature
from Bio import Alphabet
from Bio.SeqRecord import SeqRecord
from Bio._py3k import StringIO

src/b/i/biopython-HEAD/Bio/SeqIO/UniprotIO.py   biopython(Download)
from Bio import Seq
from Bio import SeqFeature
from Bio import Alphabet
from Bio.SeqRecord import SeqRecord
from Bio._py3k import StringIO

src/b/i/biopython-1.63/Bio/SeqIO/_index.py   biopython(Download)
 
from Bio import SeqIO
from Bio import Alphabet
from Bio import bgzf
from Bio.File import _IndexedSeqFileProxy, _open_for_random_access

src/b/i/biopython-HEAD/Bio/SeqIO/_index.py   biopython(Download)
 
from Bio import SeqIO
from Bio import Alphabet
from Bio import bgzf
from Bio.File import _IndexedSeqFileProxy, _open_for_random_access

src/b/i/biopython-1.63/Bio/SeqIO/InsdcIO.py   biopython(Download)
from Bio.Seq import UnknownSeq
from Bio.GenBank.Scanner import GenBankScanner, EmblScanner, _ImgtScanner
from Bio import Alphabet
from .Interfaces import SequentialSequenceWriter
from Bio import SeqFeature

src/b/i/biopython-HEAD/Bio/SeqIO/InsdcIO.py   biopython(Download)
from Bio.Seq import UnknownSeq
from Bio.GenBank.Scanner import GenBankScanner, EmblScanner, _ImgtScanner
from Bio import Alphabet
from .Interfaces import SequentialSequenceWriter
from Bio import SeqFeature

src/b/i/biopython-1.63/Bio/Phylo/PhyloXML.py   biopython(Download)
from Bio._py3k import basestring
 
from Bio import Alphabet
from Bio.Align import MultipleSeqAlignment
from Bio.Seq import Seq

src/b/i/biopython-1.63/BioSQL/Loader.py   biopython(Download)
 
# biopython
from Bio import Alphabet
from Bio.SeqUtils.CheckSum import crc64
from Bio import Entrez

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