Did I find the right examples for you? yes no      Crawl my project      Python Jobs

All Samples(14)  |  Call(14)  |  Derive(0)  |  Import(0)

src/b/i/biopython-1.63/Bio/Seq.py   biopython(Download)
        if hasattr(other, "alphabet"):
            #other should be a Seq or a MutableSeq
            if not Alphabet._check_type_compatible([self.alphabet,
                                                    other.alphabet]):
                raise TypeError("Incompatible alphabets %s and %s"
        if hasattr(other, "alphabet"):
            #other should be a Seq or a MutableSeq
            if not Alphabet._check_type_compatible([self.alphabet,
                                                    other.alphabet]):
                raise TypeError("Incompatable alphabets %s and %s"
 
        #Other should be a Seq or a MutableSeq
        if not Alphabet._check_type_compatible([self.alphabet, other_alpha]):
            raise TypeError("Incompatable alphabets %s and %s"
                            % (repr(self.alphabet), repr(other_alpha)))
                          "str(seq1)==str(seq2) to make your code explicit "
                          "and to avoid this warning.", FutureWarning)
            if not Alphabet._check_type_compatible([self.alphabet,
                                                    other.alphabet]):
                raise TypeError("Incompatable alphabets %s and %s"
        if hasattr(other, "alphabet"):
            #other should be a Seq or a MutableSeq
            if not Alphabet._check_type_compatible([self.alphabet,
                                                    other.alphabet]):
                raise TypeError("Incompatable alphabets %s and %s"

src/b/i/biopython-HEAD/Bio/Seq.py   biopython(Download)
        if hasattr(other, "alphabet"):
            #other should be a Seq or a MutableSeq
            if not Alphabet._check_type_compatible([self.alphabet,
                                                    other.alphabet]):
                raise TypeError("Incompatible alphabets %s and %s"
        if hasattr(other, "alphabet"):
            #other should be a Seq or a MutableSeq
            if not Alphabet._check_type_compatible([self.alphabet,
                                                    other.alphabet]):
                raise TypeError("Incompatable alphabets %s and %s"
 
        #Other should be a Seq or a MutableSeq
        if not Alphabet._check_type_compatible([self.alphabet, other_alpha]):
            raise TypeError("Incompatable alphabets %s and %s"
                            % (repr(self.alphabet), repr(other_alpha)))
                          "str(seq1)==str(seq2) to make your code explicit "
                          "and to avoid this warning.", FutureWarning)
            if not Alphabet._check_type_compatible([self.alphabet,
                                                    other.alphabet]):
                raise TypeError("Incompatable alphabets %s and %s"
        if hasattr(other, "alphabet"):
            #other should be a Seq or a MutableSeq
            if not Alphabet._check_type_compatible([self.alphabet,
                                                    other.alphabet]):
                raise TypeError("Incompatable alphabets %s and %s"

src/b/i/biopython-1.63/Bio/Align/__init__.py   biopython(Download)
        #Using not self.alphabet.contains(record.seq.alphabet) needs fixing
        #for AlphabetEncoders (e.g. gapped versus ungapped).
        if not Alphabet._check_type_compatible([self._alphabet, record.seq.alphabet]):
            raise ValueError("New sequence's alphabet is incompatible")
        self._records.append(record)

src/b/i/biopython-HEAD/Bio/Align/__init__.py   biopython(Download)
        #Using not self.alphabet.contains(record.seq.alphabet) needs fixing
        #for AlphabetEncoders (e.g. gapped versus ungapped).
        if not Alphabet._check_type_compatible([self._alphabet, record.seq.alphabet]):
            raise ValueError("New sequence's alphabet is incompatible")
        self._records.append(record)