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src/b/i/biopython-1.63/Bio/Blast/NCBIStandalone.py   biopython(Download)
from __future__ import print_function
 
from Bio import BiopythonDeprecationWarning
import warnings
warnings.warn("This module has been deprecated. Consider Bio.SearchIO for "
        def next(self):
            """Deprecated Python 2 style alias for Python 3 style __next__ method."""
            import warnings
            from Bio import BiopythonDeprecationWarning
            warnings.warn("Please use next(my_iterator) instead of my_iterator.next(), "

src/b/i/biopython-1.63/Bio/UniGene/UniGene.py   biopython(Download)
 
import warnings
from Bio import BiopythonDeprecationWarning
 
warnings.warn("The module Bio.UniGene.UniGene is now deprecated, "

src/b/i/biopython-1.63/Bio/SeqFeature.py   biopython(Download)
        else:
            import warnings
            from Bio import BiopythonDeprecationWarning
            warnings.warn("Rather than sub_features, use a CompoundFeatureLocation",
                          BiopythonDeprecationWarning)
    def _get_sub_features(self):
        if self._sub_features:
            import warnings
            from Bio import BiopythonDeprecationWarning
            warnings.warn("Rather using f.sub_features, f.location should be a CompoundFeatureLocation",
    def _set_sub_features(self, value):
        if value:
            import warnings
            from Bio import BiopythonDeprecationWarning
            warnings.warn("Rather than f.sub_features, use a CompoundFeatureLocation for f.location",

src/b/i/biopython-HEAD/Bio/Blast/NCBIStandalone.py   biopython(Download)
from __future__ import print_function
 
from Bio import BiopythonDeprecationWarning
import warnings
warnings.warn("This module has been deprecated. Consider Bio.SearchIO for "

src/b/i/biopython-1.63/Bio/ParserSupport.py   biopython(Download)
"""
 
from Bio import BiopythonDeprecationWarning
import warnings
warnings.warn("Bio.ParserSupport is now deprecated will be removed in a "

src/b/i/biopython-1.63/Bio/GenBank/__init__.py   biopython(Download)
        def next(self):
            """Deprecated Python 2 style alias for Python 3 style __next__ method."""
            import warnings
            from Bio import BiopythonDeprecationWarning
            warnings.warn("Please use next(my_iterator) instead of my_iterator.next(), "

src/b/i/biopython-HEAD/Bio/SeqFeature.py   biopython(Download)
        else:
            import warnings
            from Bio import BiopythonDeprecationWarning
            warnings.warn("Rather than sub_features, use a CompoundFeatureLocation",
                          BiopythonDeprecationWarning)
    def _get_sub_features(self):
        if self._sub_features:
            import warnings
            from Bio import BiopythonDeprecationWarning
            warnings.warn("Rather using f.sub_features, f.location should be a CompoundFeatureLocation",
    def _set_sub_features(self, value):
        if value:
            import warnings
            from Bio import BiopythonDeprecationWarning
            warnings.warn("Rather than f.sub_features, use a CompoundFeatureLocation for f.location",

src/b/i/biopython-HEAD/Bio/ParserSupport.py   biopython(Download)
"""
 
from Bio import BiopythonDeprecationWarning
import warnings
warnings.warn("Bio.ParserSupport is now deprecated will be removed in a "

src/b/i/biopython-HEAD/Bio/Seq.py   biopython(Download)
        You are now encouraged to use str(my_seq) instead of
        my_seq.tostring()."""
        from Bio import BiopythonDeprecationWarning
        warnings.warn("This method is obsolete; please use str(my_seq) "
                      "instead of my_seq.tostring().",
        print("ID={%s}, sequence={%s}" % (my_name, my_seq.tostring()))
        """
        from Bio import BiopythonDeprecationWarning
        warnings.warn("This method is obsolete; please use str(my_seq) "
                      "instead of my_seq.tostring().",

src/b/i/biopython-1.63/Bio/Align/__init__.py   biopython(Download)
                records = []
                import warnings
                from Bio import BiopythonDeprecationWarning
                warnings.warn("Invalid records argument: While the old "
                              "Bio.Align.Generic.Alignment class only "

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