Did I find the right examples for you? yes no      Crawl my project      Python Jobs

All Samples(35)  |  Call(0)  |  Derive(4)  |  Import(31)

src/b/i/biopython-1.63/Bio/Phylo/PhyloXML.py   biopython(Download)
from Bio.SeqFeature import SeqFeature, FeatureLocation
from Bio.SeqRecord import SeqRecord
from Bio import BiopythonWarning
 
from Bio.Phylo import BaseTree
 
 
class PhyloXMLWarning(BiopythonWarning):

src/b/i/biopython-HEAD/Bio/Phylo/PhyloXML.py   biopython(Download)
from Bio.SeqFeature import SeqFeature, FeatureLocation
from Bio.SeqRecord import SeqRecord
from Bio import BiopythonWarning
 
from Bio.Phylo import BaseTree
 
 
class PhyloXMLWarning(BiopythonWarning):

src/b/i/biopython-1.63/Bio/SeqIO/QualityIO.py   biopython(Download)
from math import log
import warnings
from Bio import BiopythonWarning, BiopythonParserWarning
 
 

src/b/i/biopython-HEAD/Bio/SeqIO/QualityIO.py   biopython(Download)
from math import log
import warnings
from Bio import BiopythonWarning, BiopythonParserWarning
 
 

src/b/i/biopython-1.63/Bio/SeqIO/InsdcIO.py   biopython(Download)
        if len(text) > self.MAX_WIDTH - self.HEADER_WIDTH:
            import warnings
            from Bio import BiopythonWarning
            warnings.warn("Annotation %r too long for %r line" % (text, tag),
                          BiopythonWarning)

src/b/i/biopython-HEAD/Bio/SeqIO/InsdcIO.py   biopython(Download)
        if len(text) > self.MAX_WIDTH - self.HEADER_WIDTH:
            import warnings
            from Bio import BiopythonWarning
            warnings.warn("Annotation %r too long for %r line" % (text, tag),
                          BiopythonWarning)

src/b/i/biopython-1.63/Bio/PDB/PDBExceptions.py   biopython(Download)
"""Some Bio.PDB-specific exceptions."""
 
from Bio import BiopythonWarning
 
 
class PDBConstructionWarning(BiopythonWarning):
    pass
 

src/b/i/biopython-HEAD/Bio/PDB/PDBExceptions.py   biopython(Download)
"""Some Bio.PDB-specific exceptions."""
 
from Bio import BiopythonWarning
 
 
class PDBConstructionWarning(BiopythonWarning):
    pass
 

src/b/i/biopython-HEAD/Bio/Seq.py   biopython(Download)
        amino_acids = ["M"]
    elif n % 3 != 0:
        from Bio import BiopythonWarning
        warnings.warn("Partial codon, len(sequence) not a multiple of three. "
                      "Explicitly trim the sequence or add trailing N before "

src/b/i/biopython-1.63/BioSQL/Loader.py   biopython(Download)
            # will become a "join" on reloading. What does BioPerl do?
            import warnings
            from Bio import BiopythonWarning
            warnings.warn("%s location operators are not fully supported"
                          % feature.location_operator, BiopythonWarning)

  1 | 2 | 3 | 4  Next