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All Samples(4)  |  Call(2)  |  Derive(0)  |  Import(2)

src/c/g/CGAT-0.2.0/CGAT/WrapperClustal.py   CGAT(Download)
 
try:
    from Bio.Clustalw import MultipleAlignCL
    from Bio.Clustalw import do_alignment
except ImportError:
        os.close( handle_tmpfile1 )
        os.close( handle_tmpfile2 )
        cline = MultipleAlignCL( filename_tmpfile1 )
        cline.set_output( filename_tmpfile2 )
 

src/c/g/cgat-HEAD/CGAT/WrapperClustal.py   cgat(Download)
 
try:
    from Bio.Clustalw import MultipleAlignCL
    from Bio.Clustalw import do_alignment
except ImportError:
        os.close(handle_tmpfile1)
        os.close(handle_tmpfile2)
        cline = MultipleAlignCL(filename_tmpfile1)
        cline.set_output(filename_tmpfile2)