Did I find the right examples for you? yes no      Crawl my project      Python Jobs

All Samples(4)  |  Call(2)  |  Derive(0)  |  Import(2)

src/c/g/CGAT-0.2.0/CGAT/WrapperClustal.py   CGAT(Download)
try:
    from Bio.Clustalw import MultipleAlignCL
    from Bio.Clustalw import do_alignment
except ImportError:
    # code needs updating for newer biopython versions
        cline.set_output( filename_tmpfile2 )
 
        align = do_alignment(cline)
 
        seqs = align.get_all_seqs()

src/c/g/cgat-HEAD/CGAT/WrapperClustal.py   cgat(Download)
try:
    from Bio.Clustalw import MultipleAlignCL
    from Bio.Clustalw import do_alignment
except ImportError:
    # code needs updating for newer biopython versions
        cline.set_output(filename_tmpfile2)
 
        align = do_alignment(cline)
 
        seqs = align.get_all_seqs()