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src/b/i/biopython-1.63/Bio/Data/CodonTable.py biopython(Download)
#The following isn't very elegant, but seems to work nicely. _merged_values = dict(IUPACData.ambiguous_rna_values.items()) _merged_values["T"] = "U" ambig_generic = AmbiguousCodonTable(generic,
src/b/i/biopython-HEAD/Bio/Data/CodonTable.py biopython(Download)
#The following isn't very elegant, but seems to work nicely. _merged_values = dict(IUPACData.ambiguous_rna_values.items()) _merged_values["T"] = "U" ambig_generic = AmbiguousCodonTable(generic,
src/b/i/biopython-HEAD/Tests/test_seq.py biopython(Download)
print("RNA Ambiguity mapping: %s" % sorted_dict(ambiguous_rna_values)) print("RNA Complement mapping: %s" % sorted_dict(ambiguous_rna_complement)) for ambig_char, values in sorted(ambiguous_rna_values.items()): compl_values = complement(values).replace("T", "U") # need to help as no alphabet print("%s={%s} --> {%s}=%s" % \
src/b/i/biopython-1.63/Tests/test_seq.py biopython(Download)
print("RNA Ambiguity mapping: %s" % sorted_dict(ambiguous_rna_values)) print("RNA Complement mapping: %s" % sorted_dict(ambiguous_rna_complement)) for ambig_char, values in sorted(ambiguous_rna_values.items()): compl_values = complement(values).replace("T", "U") # need to help as no alphabet print("%s={%s} --> {%s}=%s" % \