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src/b/i/biopython-1.63/Tests/test_EmbossPhylipNew.py   biopython(Download)
from Bio.Emboss.Applications import FSeqBootCommandline, FProtDistCommandline
from Bio.Emboss.Applications import FProtParsCommandline, FConsenseCommandline
from Bio.Emboss.Applications import FTreeDistCommandline, FDNAParsCommandline
 
#Try to avoid problems when the OS is in another language
    def test_ftreedist(self):
        """Calculate the distance between trees with ftreedist"""
        cline = FTreeDistCommandline(exes["ftreedist"],
                                     intreefile = "Phylip/horses.tree",
                                     outfile = "test_file",
                                     auto = True, filter = True)
        stdout, stderr = cline()

src/b/i/biopython-HEAD/Tests/test_EmbossPhylipNew.py   biopython(Download)
from Bio.Emboss.Applications import FSeqBootCommandline, FProtDistCommandline
from Bio.Emboss.Applications import FProtParsCommandline, FConsenseCommandline
from Bio.Emboss.Applications import FTreeDistCommandline, FDNAParsCommandline
 
#Try to avoid problems when the OS is in another language
    def test_ftreedist(self):
        """Calculate the distance between trees with ftreedist"""
        cline = FTreeDistCommandline(exes["ftreedist"],
                                     intreefile = "Phylip/horses.tree",
                                     outfile = "test_file",
                                     auto = True, filter = True)
        stdout, stderr = cline()