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src/b/i/biopython-1.63/Scripts/GenBank/find_parser_problems.py   biopython(Download)
 
handle = open(sys.argv[1], 'r')
iterator = GenBank.Iterator(handle, parser, has_header=1)
 
while True:

src/b/i/biopython-HEAD/Scripts/GenBank/find_parser_problems.py   biopython(Download)
 
handle = open(sys.argv[1], 'r')
iterator = GenBank.Iterator(handle, parser, has_header=1)
 
while True:

src/b/i/biopython-1.63/Scripts/GenBank/check_output.py   biopython(Download)
        compare_handle = open(file, "r")
 
    iterator = GenBank.Iterator(cur_handle, record_parser)
    compare_iterator = GenBank.Iterator(compare_handle)
 

src/b/i/biopython-HEAD/Scripts/GenBank/check_output.py   biopython(Download)
        compare_handle = open(file, "r")
 
    iterator = GenBank.Iterator(cur_handle, record_parser)
    compare_iterator = GenBank.Iterator(compare_handle)
 

src/b/i/biopython-1.63/Scripts/Performance/biosql_performance_load.py   biopython(Download)
handle = open(input_file, "r")
parser = GenBank.FeatureParser()
iterator = GenBank.Iterator(handle, parser)
 
# -- do the timing part

src/b/i/biopython-1.63/Scripts/GenBank/check_output_simple.py   biopython(Download)
handle = open(sys.argv[1], 'r')
 
iterator = GenBank.Iterator(handle, parser)
 
while True:

src/b/i/biopython-HEAD/Scripts/Performance/biosql_performance_load.py   biopython(Download)
handle = open(input_file, "r")
parser = GenBank.FeatureParser()
iterator = GenBank.Iterator(handle, parser)
 
# -- do the timing part

src/b/i/biopython-HEAD/Scripts/GenBank/check_output_simple.py   biopython(Download)
handle = open(sys.argv[1], 'r')
 
iterator = GenBank.Iterator(handle, parser)
 
while True:

src/b/i/biopython-1.63/Tests/test_GenBank.py   biopython(Download)
 
        handle = open(filename, 'r')
        iterator = GenBank.Iterator(handle, parser)
 
        while True:
        compare_handle = open(os.path.join("GenBank", file), "r")
 
        iterator = GenBank.Iterator(cur_handle, record_parser)
        compare_iterator = GenBank.Iterator(compare_handle)
 
                                   utils.FeatureValueCleaner())
    handle = open(os.path.join("GenBank", "arab1.gb"))
    iterator = GenBank.Iterator(handle, parser)
 
    first_record = next(iterator)

src/b/i/biopython-HEAD/Tests/test_GenBank.py   biopython(Download)
 
        handle = open(filename, 'r')
        iterator = GenBank.Iterator(handle, parser)
 
        while True:
        compare_handle = open(os.path.join("GenBank", file), "r")
 
        iterator = GenBank.Iterator(cur_handle, record_parser)
        compare_iterator = GenBank.Iterator(compare_handle)
 
                                   utils.FeatureValueCleaner())
    handle = open(os.path.join("GenBank", "arab1.gb"))
    iterator = GenBank.Iterator(handle, parser)
 
    first_record = next(iterator)