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src/b/i/biopython-1.63/Bio/SeqIO/InsdcIO.py   biopython(Download)
 
from Bio.Seq import UnknownSeq
from Bio.GenBank.Scanner import GenBankScanner, EmblScanner, _ImgtScanner
from Bio import Alphabet
from .Interfaces import SequentialSequenceWriter

src/b/i/biopython-HEAD/Bio/SeqIO/InsdcIO.py   biopython(Download)
 
from Bio.Seq import UnknownSeq
from Bio.GenBank.Scanner import GenBankScanner, EmblScanner, _ImgtScanner
from Bio import Alphabet
from .Interfaces import SequentialSequenceWriter

src/b/i/biopython-1.63/Bio/SeqIO/_convert.py   biopython(Download)
def _embl_convert_fasta(in_handle, out_handle, alphabet=None):
    """Fast EMBL to FASTA (PRIVATE)."""
    #We don't need to parse the features...
    from Bio.GenBank.Scanner import EmblScanner
    records = EmblScanner().parse_records(in_handle, do_features=False)

src/b/i/biopython-HEAD/Bio/SeqIO/_convert.py   biopython(Download)
def _embl_convert_fasta(in_handle, out_handle, alphabet=None):
    """Fast EMBL to FASTA (PRIVATE)."""
    #We don't need to parse the features...
    from Bio.GenBank.Scanner import EmblScanner
    records = EmblScanner().parse_records(in_handle, do_features=False)