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src/b/i/biopython-1.63/Bio/Phylo/NexusIO.py   biopython(Download)
    for nxtree in nex.trees:
        newroot = node2clade(nxtree, nxtree.node(nxtree.root))
        yield Newick.Tree(root=newroot, rooted=nxtree.rooted, name=nxtree.name,
                          weight=nxtree.weight)
 

src/b/i/biopython-HEAD/Bio/Phylo/NexusIO.py   biopython(Download)
    for nxtree in nex.trees:
        newroot = node2clade(nxtree, nxtree.node(nxtree.root))
        yield Newick.Tree(root=newroot, rooted=nxtree.rooted, name=nxtree.name,
                          weight=nxtree.weight)
 

src/b/i/biopython-1.63/Bio/Phylo/NewickIO.py   biopython(Download)
        self.process_clade(current_clade)
        self.process_clade(root_clade)
        return Newick.Tree(root=root_clade, rooted=self.rooted)
 
    def new_clade(self, parent=None):

src/b/i/biopython-HEAD/Bio/Phylo/NewickIO.py   biopython(Download)
        self.process_clade(current_clade)
        self.process_clade(root_clade)
        return Newick.Tree(root=root_clade, rooted=self.rooted)
 
    def new_clade(self, parent=None):