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src/b/i/biopython-1.63/Bio/Phylo/PhyloXMLIO.py   biopython(Download)
    def domain(self, elem):
        return PX.ProteinDomain(elem.text.strip(),
                int(elem.get('from')) - 1,
                int(elem.get('to')),
                confidence=_float(elem.get('confidence')),

src/b/i/biopython-HEAD/Bio/Phylo/PhyloXMLIO.py   biopython(Download)
    def domain(self, elem):
        return PX.ProteinDomain(elem.text.strip(),
                int(elem.get('from')) - 1,
                int(elem.get('to')),
                confidence=_float(elem.get('confidence')),

src/b/i/biopython-HEAD/Tests/test_PhyloXML.py   biopython(Download)
            domain_architecture=PX.DomainArchitecture(
                length=50,
                domains=[PX.ProteinDomain(*args) for args in (
                    # value,   start,   end,    confidence
                    ('FOO',     0,      5,      7.0e-26),

src/b/i/biopython-1.63/Tests/test_PhyloXML.py   biopython(Download)
            domain_architecture=PX.DomainArchitecture(
                length=50,
                domains=[PX.ProteinDomain(*args) for args in (
                    # value,   start,   end,    confidence
                    ('FOO',     0,      5,      7.0e-26),