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src/b/i/biopython-1.63/Bio/PDB/Superimposer.py   biopython(Download)
import numpy
 
from Bio.SVDSuperimposer import SVDSuperimposer
from Bio.PDB.PDBExceptions import PDBException
 
            fixed_coord[i]=fixed[i].get_coord()
            moving_coord[i]=moving[i].get_coord()
        sup=SVDSuperimposer()
        sup.set(fixed_coord, moving_coord)
        sup.run()

src/b/i/biopython-1.63/Bio/PDB/FragmentMapper.py   biopython(Download)
import numpy
 
from Bio.SVDSuperimposer import SVDSuperimposer
 
from Bio.PDB import Selection
        @rtype: float
        """
        sup=SVDSuperimposer()
        sup.set(self.coords_ca, other.coords_ca)
        sup.run()

src/b/i/biopython-HEAD/Bio/PDB/Superimposer.py   biopython(Download)
import numpy
 
from Bio.SVDSuperimposer import SVDSuperimposer
from Bio.PDB.PDBExceptions import PDBException
 
            fixed_coord[i]=fixed[i].get_coord()
            moving_coord[i]=moving[i].get_coord()
        sup=SVDSuperimposer()
        sup.set(fixed_coord, moving_coord)
        sup.run()

src/b/i/biopython-HEAD/Bio/PDB/FragmentMapper.py   biopython(Download)
import numpy
 
from Bio.SVDSuperimposer import SVDSuperimposer
 
from Bio.PDB import Selection
        @rtype: float
        """
        sup=SVDSuperimposer()
        sup.set(self.coords_ca, other.coords_ca)
        sup.run()

src/b/i/biopython-HEAD/Tests/test_SVDSuperimposer.py   biopython(Download)
        "Install NumPy if you want to use Bio.SVDSuperimposer.")
 
from Bio.SVDSuperimposer import SVDSuperimposer
 
# start with two coordinate sets (Nx3 arrays - Float0)
         [52.71, -1.18, 49.38]], 'f')
 
sup=SVDSuperimposer()
 
# set the coords

src/b/i/biopython-1.63/Tests/test_SVDSuperimposer.py   biopython(Download)
        "Install NumPy if you want to use Bio.SVDSuperimposer.")
 
from Bio.SVDSuperimposer import SVDSuperimposer
 
# start with two coordinate sets (Nx3 arrays - Float0)
         [52.71, -1.18, 49.38]], 'f')
 
sup=SVDSuperimposer()
 
# set the coords