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src/b/i/biopython-1.63/Bio/PDB/Superimposer.py   biopython(Download)
        sup=SVDSuperimposer()
        sup.set(fixed_coord, moving_coord)
        sup.run()
        self.rms=sup.get_rms()
        self.rotran=sup.get_rotran()

src/b/i/biopython-HEAD/Bio/PDB/Superimposer.py   biopython(Download)
        sup=SVDSuperimposer()
        sup.set(fixed_coord, moving_coord)
        sup.run()
        self.rms=sup.get_rms()
        self.rotran=sup.get_rotran()

src/b/i/biopython-1.63/Bio/PDB/FragmentMapper.py   biopython(Download)
        sup=SVDSuperimposer()
        sup.set(self.coords_ca, other.coords_ca)
        sup.run()
        return sup.get_rms()
 

src/b/i/biopython-HEAD/Bio/PDB/FragmentMapper.py   biopython(Download)
        sup=SVDSuperimposer()
        sup.set(self.coords_ca, other.coords_ca)
        sup.run()
        return sup.get_rms()
 

src/b/i/biopython-HEAD/Tests/test_SVDSuperimposer.py   biopython(Download)
 
# do the lsq fit
sup.run()
 
# get the rmsd

src/b/i/biopython-1.63/Tests/test_SVDSuperimposer.py   biopython(Download)
 
# do the lsq fit
sup.run()
 
# get the rmsd