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src/b/i/biopython-1.63/Bio/PDB/Superimposer.py   biopython(Download)
            moving_coord[i]=moving[i].get_coord()
        sup=SVDSuperimposer()
        sup.set(fixed_coord, moving_coord)
        sup.run()
        self.rms=sup.get_rms()

src/b/i/biopython-HEAD/Bio/PDB/Superimposer.py   biopython(Download)
            moving_coord[i]=moving[i].get_coord()
        sup=SVDSuperimposer()
        sup.set(fixed_coord, moving_coord)
        sup.run()
        self.rms=sup.get_rms()

src/b/i/biopython-1.63/Bio/PDB/FragmentMapper.py   biopython(Download)
        """
        sup=SVDSuperimposer()
        sup.set(self.coords_ca, other.coords_ca)
        sup.run()
        return sup.get_rms()

src/b/i/biopython-HEAD/Bio/PDB/FragmentMapper.py   biopython(Download)
        """
        sup=SVDSuperimposer()
        sup.set(self.coords_ca, other.coords_ca)
        sup.run()
        return sup.get_rms()

src/b/i/biopython-1.63/Tests/test_SVDSuperimposer.py   biopython(Download)
# set the coords
# y will be rotated and translated on x
sup.set(x, y)
 
# do the lsq fit

src/b/i/biopython-HEAD/Tests/test_SVDSuperimposer.py   biopython(Download)
# set the coords
# y will be rotated and translated on x
sup.set(x, y)
 
# do the lsq fit