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src/b/i/biopython-1.63/Bio/SearchIO/BlastIO/blast_tab.py   biopython(Download)
    def __init__(self, filename, comments=False, fields=_DEFAULT_FIELDS):
        SearchIndexer.__init__(self, filename, comments=comments, fields=fields)
 
        # if the file doesn't have comments,
        # get index of column used as the key (qseqid / qacc / qaccver)

src/b/i/biopython-HEAD/Bio/SearchIO/BlastIO/blast_tab.py   biopython(Download)
    def __init__(self, filename, comments=False, fields=_DEFAULT_FIELDS):
        SearchIndexer.__init__(self, filename, comments=comments, fields=fields)
 
        # if the file doesn't have comments,
        # get index of column used as the key (qseqid / qacc / qaccver)

src/b/i/biopython-1.63/Bio/SearchIO/BlatIO.py   biopython(Download)
    def __init__(self, filename, pslx=False):
        SearchIndexer.__init__(self, filename, pslx=pslx)
 
    def __iter__(self):
        """Iterates over the file handle; yields key, start offset, and length."""

src/b/i/biopython-HEAD/Bio/SearchIO/BlatIO.py   biopython(Download)
    def __init__(self, filename, pslx=False):
        SearchIndexer.__init__(self, filename, pslx=pslx)
 
    def __iter__(self):
        """Iterates over the file handle; yields key, start offset, and length."""

src/b/i/biopython-1.63/Bio/SearchIO/BlastIO/blast_xml.py   biopython(Download)
    def __init__(self, filename):
        SearchIndexer.__init__(self, filename)
        # TODO: better way to do this?
        iter_obj = self._parser(self._handle)
        self._meta, self._fallback = iter_obj._meta, iter_obj._fallback

src/b/i/biopython-HEAD/Bio/SearchIO/BlastIO/blast_xml.py   biopython(Download)
    def __init__(self, filename):
        SearchIndexer.__init__(self, filename)
        # TODO: better way to do this?
        iter_obj = self._parser(self._handle)
        self._meta, self._fallback = iter_obj._meta, iter_obj._fallback

src/b/i/biopython-1.63/Bio/SearchIO/FastaIO.py   biopython(Download)
    def __init__(self, filename):
        SearchIndexer.__init__(self, filename)
        self._handle = UndoHandle(self._handle)
 
    def __iter__(self):

src/b/i/biopython-HEAD/Bio/SearchIO/FastaIO.py   biopython(Download)
    def __init__(self, filename):
        SearchIndexer.__init__(self, filename)
        self._handle = UndoHandle(self._handle)
 
    def __iter__(self):