Bio.SearchIO._model.QueryResult.append

All Samples(8) | Call(8) | Derive(0) | Import(0)

src/b/i/biopython-1.63/Bio/SearchIO/HmmerIO/hmmer3_text.py biopython(Download)

                if not hit:
                    hit.query_description = qresult.description
                qresult.append(hit)
            for attr, value in qresult_attrs.items():
                setattr(qresult, attr, value)

src/b/i/biopython-1.63/Bio/SearchIO/BlastIO/blast_text.py biopython(Download)

                hit.seq_len = aln.length
                hit.description = hdesc
                qresult.append(hit)
 
            qresult.description = qdesc

src/b/i/biopython-HEAD/Bio/SearchIO/HmmerIO/hmmer3_text.py biopython(Download)

                if not hit:
                    hit.query_description = qresult.description
                qresult.append(hit)
            for attr, value in qresult_attrs.items():
                setattr(qresult, attr, value)

src/b/i/biopython-HEAD/Bio/SearchIO/BlastIO/blast_text.py biopython(Download)

                hit.seq_len = aln.length
                hit.description = hdesc
                qresult.append(hit)
 
            qresult.description = qdesc

src/b/i/biopython-1.63/Bio/SearchIO/FastaIO.py biopython(Download)

                        # if hit is not in qresult, append it
                        if hit.id not in qresult:
                            qresult.append(hit)
                        # otherwise, it might be the same hit with a different strand
                        else:

src/b/i/biopython-HEAD/Bio/SearchIO/FastaIO.py biopython(Download)

                        # if hit is not in qresult, append it
                        if hit.id not in qresult:
                            qresult.append(hit)
                        # otherwise, it might be the same hit with a different strand
                        else:

src/b/i/biopython-HEAD/Tests/test_SearchIO_model.py biopython(Download)

        self.assertEqual(None, qresult.description)
        # but changes to the first item's after append
        qresult.append(hit11)
        self.assertEqual('query1', qresult.id)
        self.assertEqual('<unknown description>', qresult.description)

src/b/i/biopython-1.63/Tests/test_SearchIO_model.py biopython(Download)

        self.assertEqual(None, qresult.description)
        # but changes to the first item's after append
        qresult.append(hit11)
        self.assertEqual('query1', qresult.id)
        self.assertEqual('<unknown description>', qresult.description)