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src/b/i/biopython-1.63/Bio/NeuralNetwork/Gene/Schema.py   biopython(Download)
 
from Bio import Alphabet
from Bio.Seq import MutableSeq
 
# neural network libraries
            motif += cur_letter
 
        return MutableSeq(motif, self._alphabet)
 
 

src/b/i/biopython-HEAD/Bio/NeuralNetwork/Gene/Schema.py   biopython(Download)
 
from Bio import Alphabet
from Bio.Seq import MutableSeq
 
# neural network libraries
            motif += cur_letter
 
        return MutableSeq(motif, self._alphabet)
 
 

src/b/i/biopython-1.63/Bio/HMM/MarkovModel.py   biopython(Download)
from Bio._py3k import range
 
from Bio.Seq import MutableSeq
 
 
 
        # --- traceback
        traceback_seq = MutableSeq('', state_alphabet)
 
        loop_seq = list(range(1, len(sequence)))

src/b/i/biopython-1.63/Bio/GA/Organism.py   biopython(Download)
 
# Sequence objects from Biopython
from Bio.Seq import MutableSeq
 
 
 
    for org_num in range(num_organisms):
        new_genome = MutableSeq(array.array(alphabet_type), genome_alphabet)
 
        # generate the genome randomly

src/b/i/biopython-HEAD/Bio/HMM/MarkovModel.py   biopython(Download)
from Bio._py3k import range
 
from Bio.Seq import MutableSeq
 
 
 
        # --- traceback
        traceback_seq = MutableSeq('', state_alphabet)
 
        loop_seq = list(range(1, len(sequence)))

src/b/i/biopython-HEAD/Bio/GA/Organism.py   biopython(Download)
 
# Sequence objects from Biopython
from Bio.Seq import MutableSeq
 
 
 
    for org_num in range(num_organisms):
        new_genome = MutableSeq(array.array(alphabet_type), genome_alphabet)
 
        # generate the genome randomly

src/b/i/biopython-HEAD/Bio/SeqUtils/__init__.py   biopython(Download)
from math import pi, sin, cos
 
from Bio.Seq import Seq, MutableSeq
from Bio import Alphabet
from Bio.Alphabet import IUPAC

src/b/i/biopython-1.63/Bio/NeuralNetwork/Gene/Pattern.py   biopython(Download)
# biopython
from Bio.Alphabet import _verify_alphabet
from Bio.Seq import Seq, MutableSeq
 
 

src/b/i/biopython-HEAD/Bio/NeuralNetwork/Gene/Pattern.py   biopython(Download)
# biopython
from Bio.Alphabet import _verify_alphabet
from Bio.Seq import Seq, MutableSeq
 
 

src/b/i/biopython-1.63/Bio/SeqIO/Interfaces.py   biopython(Download)
 
from Bio.Alphabet import generic_alphabet
from Bio.Seq import Seq, MutableSeq
from Bio.SeqRecord import SeqRecord
 

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