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src/b/i/biopython-1.63/Doc/examples/make_subsmat.py   biopython(Download)
print(replace_info)
 
my_lom = SubsMat.make_log_odds_matrix(my_arm)
 
print('log_odds_mat: %s' % my_lom)

src/b/i/biopython-HEAD/Doc/examples/make_subsmat.py   biopython(Download)
print(replace_info)
 
my_lom = SubsMat.make_log_odds_matrix(my_arm)
 
print('log_odds_mat: %s' % my_lom)

src/b/i/biopython-1.63/Tests/test_SubsMat.py   biopython(Download)
f.write("Total sum %.2f should be 1.0\n" % (s))
lo_mat_prot = \
SubsMat.make_log_odds_matrix(acc_rep_mat=acc_rep_mat, round_digit=1)  # ,ftab_prot
f.write("\nLog odds matrix\n")
f.write("\nLog odds half matrix\n")

src/b/i/biopython-HEAD/Tests/test_SubsMat.py   biopython(Download)
f.write("Total sum %.2f should be 1.0\n" % (s))
lo_mat_prot = \
SubsMat.make_log_odds_matrix(acc_rep_mat=acc_rep_mat, round_digit=1)  # ,ftab_prot
f.write("\nLog odds matrix\n")
f.write("\nLog odds half matrix\n")