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src/b/i/biopython-1.63/Bio/Entrez/__init__.py   biopython(Download)
#Importing these functions with leading underscore as not intended for reuse
from Bio._py3k import urlopen as _urlopen
from Bio._py3k import urlencode as _urlencode
from Bio._py3k import HTTPError as _HTTPError
 
E-utilities.""", UserWarning)
    # Open a handle to Entrez.
    options = _urlencode(params, doseq=True)
    #print cgi + "?" + options
    try:

src/b/i/biopython-HEAD/Bio/Entrez/__init__.py   biopython(Download)
#Importing these functions with leading underscore as not intended for reuse
from Bio._py3k import urlopen as _urlopen
from Bio._py3k import urlencode as _urlencode
from Bio._py3k import HTTPError as _HTTPError
 
E-utilities.""", UserWarning)
    # Open a handle to Entrez.
    options = _urlencode(params, doseq=True)
    #print cgi + "?" + options
    try:

src/b/i/biopython-1.63/Bio/Blast/NCBIWWW.py   biopython(Download)
from Bio._py3k import _as_string, _as_bytes
from Bio._py3k import urlopen as _urlopen
from Bio._py3k import urlencode as _urlencode
from Bio._py3k import Request as _Request
 
        ]
    query = [x for x in parameters if x[1] is not None]
    message = _as_bytes(_urlencode(query))
 
    # Send off the initial query to qblast.
        ]
    query = [x for x in parameters if x[1] is not None]
    message = _as_bytes(_urlencode(query))
 
    # Poll NCBI until the results are ready.  Use a 3 second wait

src/b/i/biopython-HEAD/Bio/Blast/NCBIWWW.py   biopython(Download)
from Bio._py3k import _as_string, _as_bytes
from Bio._py3k import urlopen as _urlopen
from Bio._py3k import urlencode as _urlencode
from Bio._py3k import Request as _Request
 
        ]
    query = [x for x in parameters if x[1] is not None]
    message = _as_bytes(_urlencode(query))
 
    # Send off the initial query to qblast.
        ]
    query = [x for x in parameters if x[1] is not None]
    message = _as_bytes(_urlencode(query))
 
    # Poll NCBI until the results are ready.  Use a backoff delay from 2 - 120 second wait

src/b/i/biopython-1.63/Bio/TogoWS/__init__.py   biopython(Download)
#Importing these functions with leading underscore as not intended for reuse
from Bio._py3k import urlopen as _urlopen
from Bio._py3k import urlencode as _urlencode
from Bio._py3k import quote as _quote
 
    #print(url)
    if post:
        handle = _urlopen(url, _as_bytes(_urlencode(post)))
    else:
        handle = _urlopen(url)

src/b/i/biopython-1.63/Bio/Motif/_Motif.py   biopython(Download)
        The parameters from **kwds are passed directly to the weblogo server.
        """
        from Bio._py3k import urlopen, urlencode, Request
 
        al= self._to_fasta()
            values[k]=str(v)
 
        data = urlencode(values)
        req = Request(url, data)
        response = urlopen(req)

src/b/i/biopython-HEAD/Bio/Motif/_Motif.py   biopython(Download)
        The parameters from **kwds are passed directly to the weblogo server.
        """
        from Bio._py3k import urlopen, urlencode, Request
 
        al= self._to_fasta()
            values[k]=str(v)
 
        data = urlencode(values)
        req = Request(url, data)
        response = urlopen(req)

src/b/i/biopython-1.63/Bio/motifs/__init__.py   biopython(Download)
 
        """
        from Bio._py3k import urlopen, urlencode, Request
 
        frequencies = self.format('transfac')
            values[k]=str(v)
 
        data = urlencode(values)
        req = Request(url, data)
        response = urlopen(req)

src/b/i/biopython-HEAD/Bio/motifs/__init__.py   biopython(Download)
 
        """
        from Bio._py3k import urlopen, urlencode, Request
 
        frequencies = self.format('transfac')
            values[k]=str(v)
 
        data = urlencode(values)
        req = Request(url, data)
        response = urlopen(req)

src/b/i/biopython-1.63/Bio/ExPASy/__init__.py   biopython(Download)
#Importing these functions with leading underscore as not intended for reuse
from Bio._py3k import urlopen as _urlopen
from Bio._py3k import urlencode as _urlencode
 
 
    if trembl:
        variables['T'] = 'on'
    options = _urlencode(variables)
    fullcgi = "%s?%s" % (cgi, options)
    handle = _urlopen(fullcgi)
    if trembl:
        variables['T'] = 'on'
    options = _urlencode(variables)
    fullcgi = "%s?%s" % (cgi, options)
    handle = _urlopen(fullcgi)

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