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src/b/i/biopython-1.63/Tests/test_motifs.py   biopython(Download)
    def test_alignace_parsing(self):
        """Test if Bio.motifs can parse AlignAce output files.
        """
        handle = open("motifs/alignace.out")
        record = motifs.parse(handle, "AlignAce")
    def test_meme_parser_1(self):
        """Test if Bio.motifs can parse MEME output files (first test)
        """
        handle = open("motifs/meme.out")
        record = motifs.parse(handle, 'meme')
    def test_meme_parser_2(self):
        """Test if Bio.motifs can parse MEME output files (second test)
        """
        handle = open("motifs/meme.dna.oops.txt")
        record = motifs.parse(handle, 'meme')
    def test_meme_parser_3(self):
        """Test if Bio.motifs can parse MEME output files (third test)
        """
        handle = open("motifs/meme.protein.oops.txt")
        record = motifs.parse(handle, 'meme')
    def test_meme_parser_4(self):
        """Test if Bio.motifs can parse MEME output files (fourth test)
        """
        handle = open("motifs/meme.protein.tcm.txt")
        record = motifs.parse(handle, 'meme')

src/b/i/biopython-HEAD/Tests/test_motifs.py   biopython(Download)
    def test_alignace_parsing(self):
        """Test if Bio.motifs can parse AlignAce output files.
        """
        handle = open("motifs/alignace.out")
        record = motifs.parse(handle, "AlignAce")
    def test_meme_parser_1(self):
        """Test if Bio.motifs can parse MEME output files (first test)
        """
        handle = open("motifs/meme.out")
        record = motifs.parse(handle, 'meme')
    def test_meme_parser_2(self):
        """Test if Bio.motifs can parse MEME output files (second test)
        """
        handle = open("motifs/meme.dna.oops.txt")
        record = motifs.parse(handle, 'meme')
    def test_meme_parser_3(self):
        """Test if Bio.motifs can parse MEME output files (third test)
        """
        handle = open("motifs/meme.protein.oops.txt")
        record = motifs.parse(handle, 'meme')
    def test_meme_parser_4(self):
        """Test if Bio.motifs can parse MEME output files (fourth test)
        """
        handle = open("motifs/meme.protein.tcm.txt")
        record = motifs.parse(handle, 'meme')