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src/b/i/biskit-2.4/doc/tutorial1/meganuclease.py   biskit(Download)
print com.atomContacts.__doc__
 
cont = com.atomContacts( cutoff=10 )
print cont
 

src/b/i/biskit-2.4/Biskit/Dock/PatchGeneratorFromOrbit.py   biskit(Download)
 
    ## get interface patch
    cont = com.atomContacts( cutoff=6.0 )
    rec_if = N.sum( cont, 1 )
    lig_if = N.sum( cont, 0 )

src/b/i/biskit-2.4/Biskit/Dock/PatchGenerator.py   biskit(Download)
    ## show real interface patch
    com = Complex( m_com.takeChains([0]), m_com.takeChains([1]))
    cont = com.atomContacts()
    rec_i = N.flatnonzero( N.sum( cont, 1 ) )
    lig_i = N.flatnonzero( N.sum( cont, 0 ) )