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src/b/i/biskit-2.4/Biskit/Hmmer.py   biskit(Download)
 
import Biskit.mathUtils as math
from Biskit.Errors import BiskitError
import Biskit.tools as T
import Biskit.molTools as MT
class HmmerError( BiskitError ):
    pass
 
 
class HmmerdbIndex( Executor ):

src/b/i/biskit-2.4/Biskit/ExeConfig.py   biskit(Download)
import user, os.path
 
from Biskit.Errors import BiskitError
from Biskit import EHandler
 
import Biskit.tools as T
 
 
class ExeConfigError( BiskitError ):

src/b/i/biskit-2.4/Biskit/Blast2Seq.py   biskit(Download)
import tempfile, re
import os.path
from Biskit.Errors import BiskitError
 
 
class Blast2SeqError( BiskitError ):

src/b/i/biskit-2.4/Biskit/AmberParmBuilder.py   biskit(Download)
from Biskit.LogFile import LogFile, StdLog
from Biskit.PDBModel import PDBModel
from Biskit.Errors import BiskitError
from Biskit.PDBCleaner import PDBCleaner
from Biskit.AmberLeap import AmberLeap
from Biskit import Executor
 
class AmberError( BiskitError ):

src/b/i/biskit-2.4/Biskit/AmberCrdEntropist.py   biskit(Download)
import Biskit.tools as T
## import Biskit.settings as settings
from Biskit.Errors import BiskitError
from Biskit.Executor import Executor
 
class EntropistError( BiskitError ):

src/b/i/biskit-2.4/scripts/Biskit/runPcr.py   biskit(Download)
from Biskit import BiskitError
import Biskit.settings as settings
from Biskit.Errors import BiskitError
 
 

src/b/i/biskit-2.4/Biskit/AmberEntropist.py   biskit(Download)
import Biskit.mathUtils as MU
## import Biskit.settings as settings
from Biskit.Errors import BiskitError
from Biskit.AmberCrdEntropist import AmberCrdEntropist, EntropistError
from Biskit.AmberParmBuilder import AmberParmBuilder

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