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src/b/i/biskit-2.4/Biskit/Mod/Modeller.py   biskit(Download)
            f_in = os.path.join( cwd, os.path.basename( mod_template ) )
 
        Executor.__init__(self, 'modeller',
                          template=mod_template,
                          args= f_in, # command line argument

src/b/i/biskit-2.4/Biskit/AmberCrdEntropist.py   biskit(Download)
        template = f_template or self.ptraj_script
 
        Executor.__init__( self, 'ptraj', template=template, push_inp=0, **kw )
 
        self.f_parm = T.absfile( f_parm )

src/b/i/biskit-2.4/Biskit/Xplorer.py   biskit(Download)
          log      - Biskit.LogFile, program log (None->STOUT) (default: None)
        """
        Executor.__init__( self, 'xplor', template=template, **params )
 
        if pipes is not None: