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src/b/i/biskit-2.4/Biskit/Mod/AlignerSlave.py   biskit(Download)
                    alpha_path = self.prepareT_coffee(input_file)
 
                    a.align_for_modeller_inp( pdbFiles=alpha_path,
                              fasta_templates=val["fastaTemplates"],
                              fasta_sequences=val["fastaSequences"],
                              fasta_target=val["fastaTarget"])
 
                ## For a classic project folder    
                else:
                    a.align_for_modeller_inp(pdbFiles=val["pdbFiles"],