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src/b/i/biskit-2.4/scripts/Mod/modelling_example.py   biskit(Download)
 
from Biskit.Mod import SequenceSearcher
from Biskit.Mod import TemplateSearcher
from Biskit.Mod import TemplateCleaner
from Biskit.Mod import Aligner
 
try:
    searcher = TemplateSearcher( outFolder, verbose=1, log=log )
 
    searcher.localBlast(f_target, tmp_db, 'blastp', alignments=200, e=0.001)

src/b/i/biskit-2.4/scripts/Mod/model_for_docking.py   biskit(Download)
 
from Biskit.Mod import SequenceSearcher
from Biskit.Mod import TemplateSearcher
from Biskit.Mod import TemplateCleaner
from Biskit.Mod import Aligner
 
try:
    searcher = TemplateSearcher( outFolder, verbose=1 )
 
    searcher.localBlast(f_target, tmp_db, 'blastp', alignments=200, e=0.001)