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src/b/i/biskit-2.4/Biskit/AmberParmBuilder.py   biskit(Download)
        self.m3 = PDBModel( self.wetpdb )
 
        m3prot = self.m3.compress( self.m3.maskProtein() )
        refprot= self.ref.compress( self.ref.maskProtein() )
        refprot.xplor2amber()