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src/b/i/biskit-2.4/scripts/Dock/selectModels.py   biskit(Download)
    tr = clTrajs[0].concat( *tuple( clTrajs[1:] ) )
 
    avgall = N.average( MaU.aboveDiagonal( tr.pairwiseRmsd( tc.aMask ) ) )
    print "avg rms all: %4.2f" %  avgall