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src/b/i/biskit-2.4/scripts/Mod/modelling_example.py   biskit(Download)
    _use()
 
options = tools.cmdDict( options )
#options = testOptions()
 

src/b/i/biskit-2.4/scripts/Dock/contacter.py   biskit(Download)
    _use()
 
options = t.cmdDict( defaultOptions() )
 
## ## current keys used for scoring

src/b/i/biskit-2.4/scripts/Dock/concat_complexLists.py   biskit(Download)
if __name__ == '__main__':
 
    options = T.cmdDict( {'o':'complexes_pooled.cl',
                          'mo':'changed_models',
                          'ldic':'pcr_lig/models.dic',

src/b/i/biskit-2.4/scripts/Biskit/dope.py   biskit(Download)
    _use( default )
 
options = T.cmdDict( default )
 
if options.has_key('i'):

src/b/i/biskit-2.4/scripts/Biskit/traj2ensemble.py   biskit(Download)
use()
 
o = T.cmdDict( {'o':'traj_ensemble.dat'} )
 
out = T.absfile( o['o'] )

src/b/i/biskit-2.4/scripts/Biskit/trajpool2ensemble.py   biskit(Download)
use()
 
o = T.cmdDict( {'n':10} )
 
f_in  = T.absfile( o['i'] )

src/b/i/biskit-2.4/scripts/analysis/a_compare_rms_vs_fnc.py   biskit(Download)
 
#    options = test()
    options = T.cmdDict( defOptions() )
 
    ##### COMPLEX LIST ####

src/b/i/biskit-2.4/scripts/Biskit/averageASA.py   biskit(Download)
    _use( default )
 
options = T.cmdDict( default )
 
## where to run the calculation

src/b/i/biskit-2.4/scripts/Biskit/replace_wildcard_import.py   biskit(Download)
 
 
options = t.cmdDict( {'m':'Numeric', 'as':'N', 'e':['Complex'] } )
 
module = options['m']

src/b/i/biskit-2.4/scripts/Dock/delphiBinding.py   biskit(Download)
############
 
options = T.cmdDict( {'ocom':'delphi.complex', 'o':'dg_delphi.out' } )
 
try:

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