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This is the configuration file. You are expected to make sure all the
path names and account details in here are right for you!

It is also worth creating an IToL account, requesting a batch-upload
account and entering the username and password they provide into this
file.

***************
Dependencies:-
***************(more...)

src/s/s/SSuMMo-0.3/lib/dict_to_html.py   SSuMMo(Download)
from colours import generate_HEX_colours
from ssummolib import dict_walk, get_accessions
import CONFIG
try:
	import MySQLdb
	CONFIG.mySQLcur = MySQLdb.connect(user=CONFIG.user,host=CONFIG.host,passwd=CONFIG.passwd,db=CONFIG.db).cursor()

src/s/s/SSuMMo-0.3/lib/simulate_lengths.py   SSuMMo(Download)
import subprocess
import multiprocessing
import CONFIG
from Bio import SeqIO, SeqRecord, Seq, Alphabet
try:
 
    ### CONFIGURING SSUMMO OPTIONS   ###
    CONFIG.options = opt
    ssummoOptions = SSUMMO.LocalOptions()
    defaultOptions = Options()

src/s/s/SSuMMo-0.3/lib/ssummolib.py   SSuMMo(Download)
import os, sys, re
import cPickle as pickle
import CONFIG
import multiprocessing
 

src/s/s/SSuMMo-0.3/lib/pressGenus.py   SSuMMo(Download)
import subprocess
import sys
import CONFIG
from threading import Thread
from Queue import Queue

src/s/s/SSuMMo-0.3/lib/dict_to_phyloxml.py   SSuMMo(Download)
from ssummolib import my_walk,TaxDB,fetchRank, find_start_node, dict_walk, Options
import cPickle as pickle
import CONFIG
from colours import generate_HEX_colours
 

src/s/s/SSuMMo-0.3/lib/dictify.py   SSuMMo(Download)
import time
import subprocess
import CONFIG
import multiprocessing
import threading

src/s/s/SSuMMo-0.3/lib/count_hmms.py   SSuMMo(Download)
#   pydoc count_hmms.py
import os, sys
import CONFIG
 
def __init__( self ):