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Module containing classes representing the PEATSA's model data

src/p/e/PEATDB-2.3/PEATSA/Core/Matrix.py   PEATDB(Download)
			index is the row index where the duplicate occurs (0 offset)'''
 
		import Data
 
		mutationSets = [Data.MutationSet(code) for code in self.mutations]
		Returns: a list or reduced residue codes'''
 
		import Data
 
		mutationSets = [Data.MutationSet(code) for code in self.mutations]
		Returns: a list of reduced mutation codes'''
 
		import Data
 
		mutationSets = [Data.MutationSet(code) for code in self.mutations]
		Returns a list of 2 element lists residue codes'''
 
		import Data
 
		mutationSets = [Data.MutationSet(code) for code in self.mutations]
	def substitutions(self):
 
		'''Returns a list of the amino acid substitutions present'''
 
		import Data

src/p/e/PEATDB-2.3/PEATSA/WebApp/WebScript.py   PEATDB(Download)
 
import getopt, sys, os, traceback, math
import Data
import UtilityFunctions, Exceptions
import PEATSA.Core as Core

src/p/e/PEATDB-2.3/PEATSA/WebApp/RemoteLaunch.py   PEATDB(Download)
 
import sys, os, subprocess
import Data
import WebScript, UtilityFunctions
import PEATSA.Core.PEATSAParallel as PEATSAParallel

src/p/e/PEATDB-2.3/PEATSA/WebApp/JobSubmission.py   PEATDB(Download)
import subprocess, os, urlparse, urllib2, string, time, StringIO, sys
import PEATSA.Core as Core
import UtilityFunctions, Exceptions, Data
 
def GetPDB(pdbCode, dict={}):

src/p/e/PEATDB-2.3/PEATSA/Core/__init__.py   PEATDB(Download)
'''Contains the Core classes of the PEATSA command line tool'''
import ProteinDesignTool, Data, Exceptions, PEATSAParallel
 

src/p/e/PEATDB-2.3/PEATSA/Core/Utilities.py   PEATDB(Download)
 
import os.path, getopt, sys, traceback, subprocess
import Exceptions, Environment, Data
 
allResidues = ['ALA', 'ARG', 'ASP', 'ASN', 'CYS', 'GLY', 'GLU', 'GLN', 'HIS', 'ILE', 'LEU', 'LYS', 'MET', 'PRO', 'PHE', 'SER', 'THR', 'TYR', 'TRP', 'VAL']

src/p/e/PEATDB-2.3/PEATSA/Core/ProteinDesignTool.py   PEATDB(Download)
 
import sys, os.path, datetime
import Environment, Exceptions, Programs, Utilities, Data
 
class ProteinDesignTool:

src/p/r/Products.PloneHelpCenter-4.0/Products/PloneHelpCenter/tests/CustomSetup.py   Products.PloneHelpCenter(Download)
from Products.Archetypes.utils import OrderedDict
 
import Data