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src/h/t/HTSeq-0.6.1/HTSeq/scripts/qa.py   HTSeq(Download)
from itertools import *
import numpy
import HTSeq
 
def main():

src/h/t/HTSeq-0.6.1/HTSeq/scripts/count.py   HTSeq(Download)
import sys, optparse, itertools, warnings, traceback, os.path
 
import HTSeq
 
class UnknownChrom( Exception ):

src/b/c/bcbio-nextgen-0.7.8/bcbio/rnaseq/count.py   bcbio-nextgen(Download)
# soft imports
try:
    import HTSeq
    import pandas as pd
    import gffutils

src/b/c/bcbio-nextgen-0.7.8/bcbio/provenance/programs.py   bcbio-nextgen(Download)
        assert config is not None, "Need configuration to retrieve from non-manifest installs"
        brew_vs = _get_brew_versions()
        import HTSeq
        out.append({"program": "htseq", "version": HTSeq.__version__})
        for p in _cl_progs:

src/m/g/mgkit-0.1.11/mgkit/workflow/snp_parser.py   mgkit(Download)
"""
 
import HTSeq
import gzip
import logging

src/m/g/mgkit-0.1.11/mgkit/workflow/fastq_utils.py   mgkit(Download)
import logging
import mgkit
import HTSeq
from itertools import izip
from mgkit.io.fastq import choose_header_type

src/b/c/bcbio-nextgen-HEAD/bcbio/rnaseq/count.py   bcbio-nextgen(Download)
# soft imports
try:
    import HTSeq
    import pandas as pd
    import gffutils

src/b/c/bcbio-nextgen-HEAD/bcbio/provenance/programs.py   bcbio-nextgen(Download)
        assert config is not None, "Need configuration to retrieve from non-manifest installs"
        brew_vs = _get_brew_versions()
        import HTSeq
        out.append({"program": "htseq", "version": HTSeq.__version__})
        for p in _cl_progs:

src/h/t/HTSeq-0.6.1/HTSeq/_HTSeq_internal.py   HTSeq(Download)
import HTSeq
import itertools
import numpy
 
def GenomicInterval_xrange( gi, step ):

src/r/d/rdbio-scripts-HEAD/sequenceFiles/reads-in-features.py   rdbio-scripts(Download)
import optparse
import sys
import HTSeq
import os
import time

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