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src/m/g/mgtaxa-HEAD/MGT/Proj/CrisprApp.py   mgtaxa(Download)
from MGT.Taxa import *
from MGT.FastaIO import *
from MGT.BlastDb import BlastDb,runBlast
from MGT.App import *
 
    def blastCrOne(self,**kw):
        """One job launched by blastCr()"""
        opt = self.opt
        runBlast(dbPath=opt.blDbPath,inpFile=opt.blInpFile,outFile=opt.blOutFile,paramStr="-p blastn -e 100 -W 7 -F F -m 7 -U F")
        # Now parse with relaxed cutoffs and save as numpy record array for faster loading later