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save config file
"output", "server" and debug_queue are used only for debug purpose - which one is given will be taken

src/n/a/Nagstamon-HEAD/Nagstamon/nagstamon.py   Nagstamon(Download)
    gtk.main()
    # save config
    conf.SaveConfig(output=output)
except Exception, err:
    output.error_dialog(err)