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src/c/g/cgat-HEAD/legacy/pdb_annotate_structure.py   cgat(Download)
 
    viewer = PdbTools.RasmolViewInline( pdb_lines, sys.stdout )
    viewer.Command( "echo %s" % message)
 
    if options.filename_fasta:
 
    if DEBUG:
        viewer.Command("echo cmdline: %s" % (string.join(sys.argv, " ")))
 
    if not pdb_lines:
        viewer.Command("echo error: structure not found in local database")
 
    if options.pdb_chain:
        viewer.Command( "restrict :%s" % options.pdb_chain)
        viewer.Command( "centre" )