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PipelineTracks.py - Definition of tracks in pipelines
=====================================================

:Author: Andreas Heger
:Release: $Id$
:Date: |today|
:Tags: Python

Motivation
----------(more...)

src/c/g/cgat-HEAD/CGATPipelines/pipeline_docs/pipeline_rnaseq/trackers/RnaseqReport.py   cgat(Download)
# This should be automatically gleaned from pipeline_rnaseq.py
###################################################################
import PipelineTracks
 
TRACKS = PipelineTracks.Tracks(PipelineTracks.Sample3).loadFromDirectory(

src/c/g/cgat-HEAD/CGATPipelines/pipeline_docs/pipeline_proj007/trackers/cpgReport.py   cgat(Download)
import itertools
import glob
import PipelineTracks
 
from SphinxReport.Tracker import *

src/c/g/cgat-HEAD/CGATPipelines/pipeline_docs/pipeline_medip/trackers/MedipReport.py   cgat(Download)
                                          "pipeline_medip.py")
 
import PipelineTracks
 
Sample = PipelineTracks.Sample3

src/c/g/cgat-HEAD/CGATPipelines/pipeline_docs/pipeline_cpg/trackers/cpgReport.py   cgat(Download)
import itertools
import glob
import PipelineTracks
 
from SphinxReport.Tracker import *

src/c/g/cgat-HEAD/CGATPipelines/pipeline_docs/pipeline_chipseq/python/Overlaps.py   cgat(Download)
import os, sys, re, types, itertools
import Stats
import IndexedGenome
import PipelineTracks
 

src/c/g/cgat-HEAD/CGATPipelines/pipeline_docs/pipeline_capseq/trackers/cpgReport.py   cgat(Download)
import itertools
import glob
import PipelineTracks
 
from SphinxReport.Tracker import *

src/c/g/cgat-HEAD/CGATPipelines/pipeline_docs/pipeline_benchmark_rnaseqmappers/trackers/BenchmarkReport.py   cgat(Download)
# This should be automatically gleaned from pipeline_rnaseq.py
###################################################################
import PipelineTracks
 
TRACKS = PipelineTracks.Tracks(PipelineTracks.Sample).loadFromDirectory(

src/c/g/cgat-HEAD/CGATPipelines/pipeline_docs/metapipeline_medip/trackers/MetaMedipReport.py   cgat(Download)
                                          "metapipeline_medip.py")
 
import PipelineTracks
 
Sample = PipelineTracks.Sample

src/c/g/cgat-HEAD/CGATPipelines/pipeline_docs/pipeline_metagenomeassembly/pipeline_metagenomeassembly.py   cgat(Download)
## Helper functions mapping tracks to conditions, etc
###################################################################
import PipelineTracks
 
# collect fastq.gz tracks

src/c/g/cgat-HEAD/CGATPipelines/pipeline_metagenomecommunities.py   cgat(Download)
# Helper functions mapping tracks to conditions, etc
###################################################################
import PipelineTracks
 
# collect fastq.gz tracks

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