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All Samples(2)  |  Call(1)  |  Derive(0)  |  Import(1)

src/s/e/seal-0.4.0-rc2/seal/lib/aligner/bwa/bwa_aligner.py   seal(Download)
 
import bwa_core as bwa
from bwa_iterator import BWAIterator
from seal.lib.event_monitor import QuietMonitor
 
 
    if self.__iterator is None:
      self.__iterator = BWAIterator(self.reference, self.__gopt, self.__popt,
                                    self.max_isize, len(self.__batch),
                                    visitor=self.event_monitor,