Did I find the right examples for you? yes no

All Samples(4)  |  Call(2)  |  Derive(0)  |  Import(2)

src/c/o/cogent-1.5.3/tests/test_app/test_muscle_v38.py   cogent(Download)
from cogent.util.unit_test import TestCase, main
from cogent.util.misc import flatten
from cogent.app.muscle_v38 import Muscle, muscle_seqs, aln_tree_seqs, \
        align_unaligned_seqs, build_tree_from_alignment, \
        align_and_build_tree, add_seqs_to_alignment, align_two_alignments
    def test_add_seqs_to_alignment(self):
        """Should add sequences to an alignment"""
        res = add_seqs_to_alignment(seqs_to_add, align1)
        self.assertEqual(res.toFasta(), added_align_result)
 

src/p/y/pycogent-HEAD/tests/test_app/test_muscle_v38.py   pycogent(Download)
from cogent.util.unit_test import TestCase, main
from cogent.util.misc import flatten
from cogent.app.muscle_v38 import Muscle, muscle_seqs, aln_tree_seqs, \
        align_unaligned_seqs, build_tree_from_alignment, \
        align_and_build_tree, add_seqs_to_alignment, align_two_alignments
    def test_add_seqs_to_alignment(self):
        """Should add sequences to an alignment"""
        res = add_seqs_to_alignment(seqs_to_add, align1)
        self.assertEqual(res.toFasta(), added_align_result)