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All Samples(4)  |  Call(2)  |  Derive(0)  |  Import(2)

src/c/o/cogent-1.5.3/cogent/evolve/models.py   cogent(Download)
from cogent.evolve import substitution_model
from cogent.evolve.predicate import MotifChange, replacement
from cogent.evolve.solved_models import F81, HKY85, TN93
 
__author__ = "Matthew Wakefield"
def K80(**kw):
    """Kimura 1980"""
    return HKY85(equal_motif_probs=True, optimise_motif_probs=False, **kw)
 
def JC69(**kw):

src/p/y/pycogent-HEAD/cogent/evolve/models.py   pycogent(Download)
from cogent.evolve import substitution_model
from cogent.evolve.predicate import MotifChange, replacement
from cogent.evolve.solved_models import F81, HKY85, TN93
 
__author__ = "Matthew Wakefield"
def K80(**kw):
    """Kimura 1980"""
    return HKY85(equal_motif_probs=True, optimise_motif_probs=False, **kw)
 
def JC69(**kw):