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src/c/o/cogent-1.5.3/cogent/core/alignment.py   cogent(Download)
import cogent   #will use to get at cogent.parse.fasta.MinimalFastaParser,
                #which is a circular import otherwise.
from cogent.format.alignment import save_to_filename
from cogent.core.info import Info as InfoClass
from cogent.core.sequence import frac_same, ModelSequence
        if 'order' not in kwargs:
            kwargs['order'] = self.Names
        save_to_filename(align_dict, filename, format, **kwargs)
 
    def __len__(self):

src/p/y/pycogent-HEAD/cogent/core/alignment.py   pycogent(Download)
import cogent   #will use to get at cogent.parse.fasta.MinimalFastaParser,
                #which is a circular import otherwise.
from cogent.format.alignment import save_to_filename
from cogent.core.info import Info as InfoClass
from cogent.core.sequence import frac_same, ModelSequence
        if 'order' not in kwargs:
            kwargs['order'] = self.Names
        save_to_filename(align_dict, filename, format, **kwargs)
 
    def __len__(self):