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All Samples(8)  |  Call(4)  |  Derive(0)  |  Import(4)

src/c/o/cogent-1.5.3/cogent/app/msms.py   cogent(Download)
from cogent.app.util import CommandLineApplication, ResultPath
from cogent.app.parameters import FlagParameter, ValuedParameter
from cogent.format.xyzrn import XYZRNWriter
from cogent.parse.msms import parse_VertFile
 
            # write XYZR data
            fh = open(self._input_filename, 'wb')
            XYZRNWriter(fh, data)
            fh.close()
            #

src/p/y/pycogent-HEAD/cogent/app/msms.py   pycogent(Download)
from cogent.app.util import CommandLineApplication, ResultPath
from cogent.app.parameters import FlagParameter, ValuedParameter
from cogent.format.xyzrn import XYZRNWriter
from cogent.parse.msms import parse_VertFile
 
            # write XYZR data
            fh = open(self._input_filename, 'wb')
            XYZRNWriter(fh, data)
            fh.close()
            #

src/c/o/cogent-1.5.3/cogent/format/structure.py   cogent(Download)
#!/usr/bin/env python
 
import os
from cogent.format.pdb import PDBWriter, PDBXWriter
from cogent.format.xyzrn import XYZRNWriter

src/p/y/pycogent-HEAD/cogent/format/structure.py   pycogent(Download)
#!/usr/bin/env python
 
import os
from cogent.format.pdb import PDBWriter, PDBXWriter
from cogent.format.xyzrn import XYZRNWriter

src/c/o/cogent-1.5.3/tests/test_format/test_xyzrn.py   cogent(Download)
    def test_write_atom(self):
        fd, fn = tempfile.mkstemp()
        os.close(fd)
        handle = open(fn, 'wb')
        xyzrn.XYZRNWriter(handle, [self.atom17])

src/p/y/pycogent-HEAD/tests/test_format/test_xyzrn.py   pycogent(Download)
    def test_write_atom(self):
        fd, fn = tempfile.mkstemp()
        os.close(fd)
        handle = open(fn, 'wb')
        xyzrn.XYZRNWriter(handle, [self.atom17])