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src/c/o/cogent-1.5.3/tests/test_maths/test_stats/test_cai/test_util.py   cogent(Download)
from math import log, exp
from operator import mul
from cogent.maths.stats.cai.util import cu, as_rna, synonyms_to_rna, \
    get_synonyms, sum_codon_freqs, norm_to_max, arithmetic_mean, \
    geometric_mean, codon_adaptiveness_all, codon_adaptiveness_blocks, \
    def test_sum_codon_freqs(self):
        """sum_codon_freqs should add list of codon freqs together, incl, missing keys"""
        d = {'x':3, 'UUU':5, 'UAC':3}
        d2 = {'y':5, 'UUU':1, 'AGG':2}
        result = sum_codon_freqs([d,d2])

src/p/y/pycogent-HEAD/tests/test_maths/test_stats/test_cai/test_util.py   pycogent(Download)
from math import log, exp
from operator import mul
from cogent.maths.stats.cai.util import cu, as_rna, synonyms_to_rna, \
    get_synonyms, sum_codon_freqs, norm_to_max, arithmetic_mean, \
    geometric_mean, codon_adaptiveness_all, codon_adaptiveness_blocks, \
    def test_sum_codon_freqs(self):
        """sum_codon_freqs should add list of codon freqs together, incl, missing keys"""
        d = {'x':3, 'UUU':5, 'UAC':3}
        d2 = {'y':5, 'UUU':1, 'AGG':2}
        result = sum_codon_freqs([d,d2])