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src/q/i/qiime-1.8.0/qiime/stats.py   qiime(Download)
from numpy.random import permutation
from cogent.util.misc import combinate, create_dir
from cogent.maths.stats.test import t_one_sample
 
from biom.table import table_factory, DenseOTUTable
        mean_differences = mean(differences)
        median_differences = median(differences)
        t_one_sample_results = t_one_sample(differences)
        t = t_one_sample_results[0]
        p_value = t_one_sample_results[1]

src/q/i/qiime-HEAD/qiime/stats.py   qiime(Download)
                   median, nan, min as np_min, max as np_max)
from numpy.random import permutation
from cogent.maths.stats.test import t_one_sample
from biom.table import table_factory, DenseOTUTable
from skbio.core.distance import DistanceMatrix
        mean_differences = mean(differences)
        median_differences = median(differences)
        t_one_sample_results = t_one_sample(differences)
        t = t_one_sample_results[0]
        p_value = t_one_sample_results[1]