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src/c/o/cogent-1.5.3/cogent/motif/k_word.py   cogent(Download)
#!/usr/bin/env python
"""MotifFinder that searches for over-represented k-words in an alignment."""
 
from __future__ import division
from cogent.motif.util import Motif, Module, ModuleFinder, ModuleConsolidator, \
class KWordModuleFinder(ModuleFinder):
    """ModuleFinder that finds all k-words in an alignment.
    """
 
    def __init__(self,Alignment,MolType):

src/p/y/pycogent-HEAD/cogent/motif/k_word.py   pycogent(Download)
#!/usr/bin/env python
"""MotifFinder that searches for over-represented k-words in an alignment."""
 
from __future__ import division
from cogent.motif.util import Motif, Module, ModuleFinder, ModuleConsolidator, \
class KWordModuleFinder(ModuleFinder):
    """ModuleFinder that finds all k-words in an alignment.
    """
 
    def __init__(self,Alignment,MolType):