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All Samples(6)  |  Call(6)  |  Derive(0)  |  Import(0)

src/c/o/cogent-1.5.3/cogent/parse/meme.py   cogent(Download)
                alphabet,remap_dict))
        for module in meme_motif_results.Modules:
            meme_motif_results.Motifs.append(Motif(module))
    return meme_motif_results
 

src/c/o/cogent-1.5.3/cogent/parse/gibbs.py   cogent(Download)
 
    for ct, module in enumerate(gibbs_motif_results.Modules):
        gibbs_motif_results.Motifs.append(Motif(module))
    gibbs_motif_results.Alphabet=module.Alphabet
    return gibbs_motif_results

src/c/o/cogent-1.5.3/cogent/motif/k_word.py   cogent(Download)
                k_word_results.Modules.append(module)
                #Create a Motif from the module and append to Motifs list
                k_word_results.Motifs.append(Motif(module))
        return k_word_results
 

src/p/y/pycogent-HEAD/cogent/parse/meme.py   pycogent(Download)
                alphabet,remap_dict))
        for module in meme_motif_results.Modules:
            meme_motif_results.Motifs.append(Motif(module))
    return meme_motif_results
 

src/p/y/pycogent-HEAD/cogent/parse/gibbs.py   pycogent(Download)
 
    for ct, module in enumerate(gibbs_motif_results.Modules):
        gibbs_motif_results.Motifs.append(Motif(module))
    gibbs_motif_results.Alphabet=module.Alphabet
    return gibbs_motif_results

src/p/y/pycogent-HEAD/cogent/motif/k_word.py   pycogent(Download)
                k_word_results.Modules.append(module)
                #Create a Motif from the module and append to Motifs list
                k_word_results.Motifs.append(Motif(module))
        return k_word_results